Croco Doc

Model Doc

  • 1. Governing Equations
  • 2. Model variables
  • 3. Grid and Coordinates
  • 4. Numerics
  • 5. Parametrizations
  • 6. Parallelisation
  • 7. Atmospheric Surface Boundary Layer
  • 8. Open boundaries conditions
  • 9. Rivers
  • 10. Tides
  • 11. Nesting Capabilities
  • 12. Sediment and Biology models
    • 12.1. Bottom Boundary Layer model
    • 12.2. Sediment models
    • 12.3. Biogeochemical models
    • 12.4. Lagrangian floats
  • 13. Coupling CROCO with other models
  • 14. I/O and Online Diagnostics
  • 15. Review of test cases
  • 16. Appendices

Tutorials

  • 1. System requirements
  • 2. Download
  • 3. Contents & Architecture
  • 4. Summary of essential steps
  • 5. Test Cases
  • 6. Regional: Preparing your configuration
  • 7. Regional: Preprocessing (Matlab)
  • 8. Compiling
  • 9. Running the model
  • 10. Increasing the resolution: BENGUELA_VHR
  • 11. Running with interannual forcing
  • 12. Nesting Tutorial
  • 13. Adding Rivers
  • 14. Adding tides
  • 15. Visualization (Matlab)
  • 16. Visualization (Python)
  • 17. NBQ Tutorial
  • 18. Coupling tutorial
  • 19. Littoral dynamics tutorial
  • 20. Realistic coastal configuration
  • 21. XIOS
  • 22. Tips
  • 23. CROCO/MUSTANG tutorial & tips
  • 24. TRAINING 2019: DATARMOR specific
  • 25. Ifremer specific
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12. Sediment and Biology models¶

  • 12.1. Bottom Boundary Layer model
  • 12.2. Sediment models
    • 12.2.1. USGS Sediment Model
      • 12.2.1.1. Sediment bed
      • 12.2.1.2. Suspended-sediment transport
      • 12.2.1.3. Bedload transport
        • 12.2.1.3.1. Meyer-Peter Müeller (1948) : Transport by currents
        • 12.2.1.3.2. van der A (2013): Transport by nonlinear waves
      • 12.2.1.4. Morphology
      • 12.2.1.5. Sediment Density
    • 12.2.2. MUSTANG Sediment model
      • 12.2.2.1. MUSTANG presentation
      • 12.2.2.2. MUSTANG user guide
        • 12.2.2.2.1. Input file : croco.in
        • 12.2.2.2.2. Input file : param.h
        • 12.2.2.2.3. Input file : Substance namelist
        • 12.2.2.2.4. Input file : Mustang namelist
        • 12.2.2.2.5. Input file : Initialization of the sediment cover
        • 12.2.2.2.6. Input file : Wave
        • 12.2.2.2.7. Input file : Solid discharge in rivers
        • 12.2.2.2.8. Output options
        • 12.2.2.2.9. Available CPP keys
      • 12.2.2.3. MUSTANG technical documentation
        • 12.2.2.3.1. Overall architecture of the module
        • 12.2.2.3.2. Initialization
        • 12.2.2.3.3. Temporal loop
        • 12.2.2.3.4. Roughness length
        • 12.2.2.3.5. Shear stress
        • 12.2.2.3.6. Settling
        • 12.2.2.3.7. Flocculation with FLOCMOD
        • 12.2.2.3.8. Erosion process
        • 12.2.2.3.9. Deposit process
        • 12.2.2.3.10. Consolidation
        • 12.2.2.3.11. Diffusion within sediment and at interface
        • 12.2.2.3.12. Bioturbation
        • 12.2.2.3.13. Morphodynamic
      • 12.2.2.4. FAQ and known issues
        • 12.2.2.4.1. Coarse sediment in MUSTANG
        • 12.2.2.4.2. Not yet implemented features
      • 12.2.2.5. MUSTANG references
  • 12.3. Biogeochemical models
  • 12.4. Lagrangian floats
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